molecular formula C23H20F3N5O2S2 B601069 Dabrafénib CAS No. 1195765-45-7

Dabrafénib

Numéro de catalogue: B601069
Numéro CAS: 1195765-45-7
Poids moléculaire: 519.6 g/mol
Clé InChI: BFSMGDJOXZAERB-UHFFFAOYSA-N
Attention: Uniquement pour un usage de recherche. Non destiné à un usage humain ou vétérinaire.
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Mécanisme D'action

Target of Action

Dabrafenib is a potent and selective inhibitor of some mutated forms of the protein kinase B-raf (BRAF) . The primary target of Dabrafenib is the BRAF V600E mutation, which is a serine/threonine protein kinase involved in cell growth .

Mode of Action

Dabrafenib works by binding to the ATP pocket of the BRAF enzyme, thereby inhibiting its activity . This inhibition is competitive and selective, with Dabrafenib showing a higher affinity for mutant forms of BRAF, including BRAF V600E, BRAF V600K, and BRAF V600D .

Biochemical Pathways

The primary biochemical pathway affected by Dabrafenib is the mitogen-activated protein kinase (MAPK) pathway . The BRAF mutations result in the activation of the MAPK pathway, which may promote tumor cell growth . By inhibiting BRAF, Dabrafenib disrupts this pathway, leading to a decrease in tumor cell proliferation .

Pharmacokinetics

The metabolism of Dabrafenib is primarily mediated by CYP2C8 and CYP3A4 to form hydroxy-dabrafenib . Hydroxy-dabrafenib is further oxidized via CYP3A4 to form carboxy-dabrafenib, which is subsequently excreted in bile and urine . Carboxy-dabrafenib is decarboxylated to form desmethyl-dabrafenib, which may be reabsorbed from the gut .

Result of Action

The molecular and cellular effects of Dabrafenib’s action include the regression and decreased proliferation of cells . By inhibiting the MAPK pathway in BRAF mutated cells, Dabrafenib leads to a decrease in tumor cell growth . This results in the regression of the cells and a decrease in their proliferation .

Action Environment

The action, efficacy, and stability of Dabrafenib can be influenced by various environmental factors. For instance, the presence of other drugs can affect the metabolism of Dabrafenib, potentially altering its efficacy . Additionally, factors such as the patient’s overall health, the presence of other diseases, and individual genetic factors can also influence the action of Dabrafenib .

Analyse Biochimique

Biochemical Properties

Dabrafenib acts as a competitive and selective BRAF inhibitor by binding to its ATP pocket . It has a higher affinity for mutant forms of BRAF, including BRAF V600E, BRAF V600K, and BRAF V600D . BRAF is a serine/threonine protein kinase and is involved in activating the RAS/MAPK pathway .

Cellular Effects

Dabrafenib has multifaceted influences on cells, particularly on migration at concentrations of 10 and 25 μM . It induces a decrease in cell viability, impedes cellular adhesion to the matrix, inhibits cellular aggregation and spheroid formation, arrests the cell cycle in the G1 phase, and induces apoptosis .

Molecular Mechanism

Dabrafenib inhibits the MAPK pathway by targeting the BRAF V600E mutation . This inhibition results in decreased MEK and ERK phosphorylation and inhibition of cell proliferation .

Temporal Effects in Laboratory Settings

In a BRAF V600E-containing xenograft model of human melanoma, orally administered dabrafenib inhibited ERK activation, downregulated Ki67, and upregulated p27, leading to tumor growth inhibition . Dabrafenib also induced MAPK pathway activation in wild-type BRAF cells through CRAF (RAF1) signaling .

Dosage Effects in Animal Models

In a clinically relevant multidose cisplatin mouse model, dabrafenib given orally twice daily with cisplatin showed protective effects as determined by functional hearing tests and cochlear outer hair cell counts . A dabrafenib dose of 3 mg/kg BW, twice daily, in mice, was determined to be the minimum effective dose .

Metabolic Pathways

The main elimination route of dabrafenib is the oxidative metabolism via CYP3A4/2C8 and biliary excretion . Among the three major metabolites identified, hydroxy-dabrafenib appears to contribute to the pharmacological activity .

Transport and Distribution

Dabrafenib is almost completely absorbed after administration of the recommended dose of 150 mg twice daily . It shows a time-dependent increase in apparent clearance following multiple doses, which is likely due to induction of its own metabolism through cytochrome P450 (CYP) 3A4 .

Subcellular Localization

The distinctive subcellular localization of PCTAIRE CDKs in the cytoplasm and at the plasma membrane, often in association with cytoskeletal elements, suggests roles in vesicular transport, adhesion, and cell motility

Analyse Des Réactions Chimiques

Dabrafenib subit diverses réactions chimiques, impliquant principalement un métabolisme oxydatif via les enzymes du cytochrome P450 CYP3A4 et CYP2C8 . Les principaux métabolites formés comprennent l'hydroxy-dabrafenib, qui contribue à l'activité pharmacologique du composé . Les réactifs couramment utilisés dans ces réactions comprennent la formamide et diverses bases . Les principaux produits de ces réactions sont les métabolites qui sont excrétés dans la bile et l'urine .

Applications de la recherche scientifique

Dabrafenib a un large éventail d'applications en recherche scientifique, en particulier dans les domaines de l'oncologie et de la pharmacologie. Il est utilisé pour étudier les effets des mutations BRAF sur la prolifération cellulaire et la croissance tumorale . En association avec le trametinib, le dabrafenib a montré qu'il améliorait les taux de réponse et la survie sans progression chez les patients atteints de cancers porteurs de la mutation BRAF V600E . En outre, le dabrafenib est utilisé dans des études précliniques pour étudier son potentiel dans le traitement d'autres types de cancer, tels que les cancers colorectaux et les cancers du poumon non à petites cellules .

Mécanisme d'action

Dabrafenib est un inhibiteur compétitif et sélectif de la kinase BRAF, ciblant spécifiquement la poche ATP de l'enzyme . Il a une affinité plus élevée pour les formes mutantes de BRAF, y compris BRAF V600E, BRAF V600K et BRAF V600D . En inhibant BRAF, le dabrafenib perturbe la voie de signalisation MAPK, entraînant l'arrêt du cycle cellulaire et l'apoptose dans les cellules cancéreuses . Ce mécanisme d'action rend le dabrafenib efficace dans le traitement des cancers induits par des mutations BRAF .

Propriétés

IUPAC Name

N-[3-[5-(2-aminopyrimidin-4-yl)-2-tert-butyl-1,3-thiazol-4-yl]-2-fluorophenyl]-2,6-difluorobenzenesulfonamide
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI

InChI=1S/C23H20F3N5O2S2/c1-23(2,3)21-30-18(19(34-21)16-10-11-28-22(27)29-16)12-6-4-9-15(17(12)26)31-35(32,33)20-13(24)7-5-8-14(20)25/h4-11,31H,1-3H3,(H2,27,28,29)
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI Key

BFSMGDJOXZAERB-UHFFFAOYSA-N
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Canonical SMILES

CC(C)(C)C1=NC(=C(S1)C2=NC(=NC=C2)N)C3=C(C(=CC=C3)NS(=O)(=O)C4=C(C=CC=C4F)F)F
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Molecular Formula

C23H20F3N5O2S2
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

DSSTOX Substance ID

DTXSID20152499
Record name Dabrafenib
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Molecular Weight

519.6 g/mol
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Solubility

very slightly soluble at pH 1
Record name Dabrafenib
Source DrugBank
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Mechanism of Action

Dabrafenib is a competitive and selective BRAF inhibitor by binding to its ATP pocket.. Although dabrafenib can inhibit wild-type BRAF, it has a higher affinity for mutant forms of BRAF, including BRAF V600E, BRAF V600K, and BRAF V600D. BRAF is a serine/threonine protein kinase and is involved in activating the RAS/RAF/MEK/ERK or MAPK pathway, a pathway that is implicated in cell cycle progression, cell proliferation, and arresting apoptosis.Therefore, constitutive active mutation of BRAF such as BRAF V600E is frequently observed in many types of cancer, including melanoma, lung cancer, and colon cancer.
Record name Dabrafenib
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CAS No.

1195765-45-7
Record name Dabrafenib
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Record name Dabrafenib
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Record name N-[3-[5-(2-aminopyrimidin-4-yl)-2-tert-butyl-1,3-thiazol-4-yl]-2-fluorophenyl]-2,6-difluorobenzenesulfonamide
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Record name DABRAFENIB
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Synthesis routes and methods I

Procedure details

Following a procedure analogous to the procedure described in Example 51, Step B using N-{3-[5-(2-chloro-4-pyrimidinyl)-2-(1,1-dimethylethyl)-1,3-thiazol-4-yl]-2-fluorophenyl}-2,6-difluorobenzenesulfonamide (196 mg, 0.364 mmol) and ammonia in methanol 7M (8 ml, 56.0 mmol) and heating to 90° C. for 24 h, the title compound, N-{3-[5-(2-amino-4-pyrimidinyl)-2-(1,1-dimethylethyl)-1,3-thiazol-4-yl]-2-fluorophenyl}-2,6-difluorobenzenesulfonamide was obtained (94 mg, 47% yield). 1H NMR (400 MHz, DMSO-d6) δ ppm 10.83 (s, 1H), 7.93 (d, J=5.2 Hz, 1H), 7.55-7.70 (m, 1H), 7.35-7.43 (m, 1H), 7.31 (t, J=6.3 Hz, 1H), 7.14-7.27 (m, 3H), 6.70 (s, 2H), 5.79 (d, J=5.13 Hz, 1H), 1.35 (s, 9H). MS (ESI): 519.9 [M+H]+.

Synthesis routes and methods II

Procedure details

In 1 gal pressure reactor, a mixture of N-{3-[5-(2-chloro-4-pyrimidinyl)-2-(1,1-dimethylethyl)-1,3-thiazol-4-yl]-2-fluorophenyl}-2,6-difluorobenzenesulfonamide (120 g) prepared in accordance with Step C, above, and ammonium hydroxide (28-30%, 2.4 L, 20 vol) was heated in the sealed pressure reactor to 98-103° C. and stirred at this temperature for 2 hours. The reaction was cooled slowly to room temperature (20° C.) and stirred overnight. The solids were filtered and washed with minimum amount of the mother liquor and dried under vacuum. The solids were added to a mixture of EtOAc (15 vol)/water (2 vol) and heated to complete dissolution at 60-70° C. and the aqueous layer was removed and discarded. The EtOAC layer was charged with water (1 vol) and neutralized with aq. HCl to ˜pH 5.4-5.5. and added water (1 vol). The aqueous layer was removed and discarded at 60-70° C. The organic layer was washed with water (1 vol) at 60-70° C. and the aqueous layer was removed and discarded. The organic layer was filtered at 60° C. and concentrated to 3 volumes. EtOAc (6 vol) was charged into the mixture and heated and stirred at 72° C. for 10 min, then cooled to 20° C. and stirred overnight. EtOAc was removed via vacuum distillation to concentrate the reaction mixture to ˜3 volumes. The reaction mixture was maintained at ˜65-70° C. for ˜30 mins. Product crystals having the same crystal form as those prepared in Example 58b (and preparable by the procedure of Example 58b), above, in heptanes slurry were charged. Heptane (9 vol) was slowly added at 65-70° C. The slurry was stirred at 65-70° C. for 2-3 hours and then cooled slowly to 0-5° C. The product was filtered, washed with EtOAc/heptane (3/1 v/v, 4 vol) and dried at 45° C. under vacuum to obtain N-{3-[5-(2-amino-4-pyrimidinyl)-2-(1,1-dimethylethyl)-1,3-thiazol-4-yl]-2-fluorophenyl}-2,6-difluorobenzenesulfonamide (102.3 g, 88%).

Synthesis routes and methods III

Procedure details

Add N-{3-[5-(2-chloro-4-pyrimidinyl)-2-(1,1-dimethylethyl)-1,3-thiazol-4-yl]-2-fluorophenyl}-2,6-difluorobenzenesulfonamide (196 mg, 0.364 mmol) and 7M methanol solution of ammonia (8 ml, 56 mmol) into a 25 mL autoclave, heat to 90° C. and react for 24 h; when the TLC shows the raw material is completely reacted, cool the above reaction system to room temperature, filter to get N-{3-[5-(2-amino-4-pyrimidinyl)-2-(1,1-dimethylethyl)-1,3-thiazol-4-yl]-2-fluorophenyl}-2,6-difluorobenzenesulfonamide (i.e. Dabrafenib). 1H-NMR (400 MHz, DMSO-d6) δppm 10.83 (s, 1H), 7.93 (d, J=5.2 Hz, 1H), 7.55-7.70 (m, 1H), 7.35-7.43 (m, 1H), 7.31 (t, J=6.3 Hz, 1H), 7.14-7.27 (m, 3H), 6.70 (s, 2H), 5.79 (d, J=5.13 Hz, 1H), 1.35 (s, 9H).
Quantity
8 mL
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reactant
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0 (± 1) mol
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solvent
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[Compound]
Name
raw material
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reactant
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Customer
Q & A

Q1: What is the primary molecular target of Dabrafenib?

A1: Dabrafenib is a potent ATP-competitive inhibitor specifically targeting the V600 mutant B-Raf kinase (BRAF), primarily BRAF V600E and to a lesser extent BRAF V600K. [, , , ]

Q2: How does Dabrafenib's inhibition of BRAF affect downstream signaling?

A2: Dabrafenib binding to BRAF prevents the phosphorylation and activation of downstream MEK proteins (MEK1 and MEK2), effectively inhibiting the RAS/RAF/MEK/ERK (MAPK) signaling pathway. This pathway is crucial for cell division, differentiation, and various developmental processes. [, , ]

Q3: What is the molecular formula and weight of Dabrafenib?

A3: The provided research papers do not explicitly state the molecular formula and weight of Dabrafenib. Please refer to drug information resources like PubChem or Drugbank for this information.

Q4: Is there any spectroscopic data available for Dabrafenib in the research?

A4: The research papers do not provide detailed spectroscopic data for Dabrafenib.

Q5: How does light exposure affect Dabrafenib stability?

A5: Dabrafenib exhibits photosensitivity in both organic and aqueous solutions, leading to its degradation and the formation of a novel fluorescent derivative, dabrafenib_photo 2. []

Q6: What are the implications of Dabrafenib's photosensitivity?

A6: Researchers handling Dabrafenib should be aware of its photosensitivity and take precautions during storage and experiments to minimize light exposure. This includes using amber vials for storage and performing experiments under controlled lighting conditions. []

Q7: Does Dabrafenib exhibit any catalytic properties itself?

A7: Dabrafenib is not described as possessing intrinsic catalytic properties. It functions as an enzyme inhibitor, specifically targeting BRAF kinase.

Q8: Has computational chemistry been used to study Dabrafenib?

A8: The provided research papers do not extensively discuss computational chemistry studies specific to Dabrafenib.

Q9: What is known about the Structure-Activity Relationship (SAR) of Dabrafenib?

A9: While specific SAR studies are not detailed in the research, it's understood that modifications impacting Dabrafenib's interaction with the ATP-binding site of BRAF V600E/K will alter its potency and selectivity. [, ]

Q10: What is the recommended storage for Dabrafenib?

A10: Given its photosensitivity, Dabrafenib should be stored in amber vials to protect from light degradation. Specific temperature and storage conditions would be outlined in the manufacturer's information. []

Q11: Do the provided research papers discuss SHE regulations related to Dabrafenib?

A11: The research papers primarily focus on Dabrafenib's biological activity and clinical effects and do not delve into SHE regulations.

Q12: How is Dabrafenib metabolized in the body?

A12: Dabrafenib is primarily metabolized by CYP2C8 (56%-67%) and CYP3A4 (24%) enzymes in the liver. []

Q13: Are there any known drug-drug interactions (DDIs) with Dabrafenib?

A13: Dabrafenib is a potential inducer of CYP3A4 and can be a victim of both CYP3A4 and CYP2C8 inhibitors. Co-administration with strong inhibitors of these enzymes, like ketoconazole (CYP3A4) or gemfibrozil (CYP2C8), can significantly increase Dabrafenib exposure. [, ]

Q14: Does Dabrafenib affect the metabolism of other drugs?

A14: Yes, Dabrafenib has shown inhibition of several CYP enzymes in vitro, including CYP2C8, 2C9, 2C19, 3A4. Notably, it can decrease the AUC of S-warfarin, a CYP2C9 substrate, indicating a potential for interaction. [, ]

Q15: What is the clinical significance of Dabrafenib's interaction with CYP enzymes?

A15: Clinicians should be cautious when co-prescribing Dabrafenib with drugs metabolized by CYP2C8 and CYP3A4, as dose adjustments may be necessary to avoid adverse events or reduced efficacy. Monitoring for potential drug interactions is essential. [, , ]

Q16: Which human melanoma cell lines have been used to study Dabrafenib's efficacy in vitro?

A16: Several human melanoma cell lines, including A375, 397, 624.38, WM3918, WM9838BR, WM983B, and DB-1, have been used in various studies to assess Dabrafenib's impact on cell signaling, proliferation, and response to treatment. [, , ]

Q17: What in vivo models have been used to study Dabrafenib?

A17: Mouse xenograft models implanted with human melanoma cells have been used to assess Dabrafenib's efficacy in vivo, allowing for tumor growth monitoring and assessment of therapeutic response. []

Q18: What are the key findings from clinical trials evaluating Dabrafenib?

A18: Clinical trials have demonstrated that Dabrafenib, as monotherapy or combined with Trametinib (a MEK inhibitor), significantly improves progression-free survival and overall survival in patients with BRAF V600E/K-mutated melanoma. [, , , , ]

Q19: What are the mechanisms of resistance to Dabrafenib?

A19: One of the primary resistance mechanisms to Dabrafenib involves the reactivation of the MAPK pathway, often through the development of new mutations in NRAS or KRAS, or through upregulation of growth factor receptors like EGFR. [, , ]

Q20: Is there cross-resistance between Dabrafenib and other BRAF inhibitors?

A20: Cross-resistance between Dabrafenib and other BRAF inhibitors, such as Vemurafenib, can occur. This is often due to shared resistance mechanisms involving reactivation of the MAPK pathway or other signaling pathways that bypass BRAF inhibition. []

Q21: What are the common cutaneous side effects observed with Dabrafenib?

A21: Common cutaneous side effects include papillomas, palmoplantar hyperkeratosis, alopecia, and seborrheic dermatitis-like eruption. In some cases, development of keratoacanthoma-like squamous cell carcinoma has been reported. []

Q22: Are there any specific drug delivery strategies being explored for Dabrafenib?

A22: The research papers provided do not delve into specific drug delivery strategies being investigated for Dabrafenib.

Q23: What is the primary biomarker for selecting patients for Dabrafenib treatment?

A23: The presence of BRAF V600E or V600K mutations in tumor tissue is the primary biomarker for identifying patients who are eligible for treatment with Dabrafenib. [, , , ]

Q24: Are there any biomarkers being investigated to monitor response to Dabrafenib treatment?

A24: Research suggests that circulating levels of the PTTG1 protein might serve as a potential biomarker for monitoring patient response to targeted therapy, including Dabrafenib. []

Q25: What analytical techniques are commonly used to quantify Dabrafenib and its metabolites?

A25: Liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) is commonly employed for quantifying Dabrafenib and its metabolites in biological samples. [, ]

Q26: Do the provided research papers discuss the environmental impact of Dabrafenib?

A26: The environmental impact and degradation of Dabrafenib are not discussed in the provided research papers.

Q27: Are there any studies on the dissolution and solubility of Dabrafenib?

A27: The provided research papers do not specifically address the dissolution and solubility characteristics of Dabrafenib.

Q28: What are the key parameters assessed during the validation of analytical methods for Dabrafenib?

A28: While not explicitly detailed, validation of analytical methods like LC-MS/MS for Dabrafenib quantification would involve assessing accuracy, precision, specificity, linearity, range, limit of detection, limit of quantification, and robustness. [, , ]

Q29: Do the research papers discuss specific quality control measures for Dabrafenib?

A29: The research papers focus on scientific aspects and do not delve into detailed quality control measures employed during Dabrafenib development and manufacturing.

Q30: Does Dabrafenib have any known impact on the immune system?

A30: Dabrafenib, while not directly targeting the immune system, has been shown to impact the tumor microenvironment. Research suggests it can modulate the differentiation and function of myeloid-derived suppressor cells (MDSCs), which play a role in immune suppression within tumors. [, ]

Q31: Are there any known interactions between Dabrafenib and drug transporters?

A31: Specific information regarding interactions between Dabrafenib and drug transporters is not provided in the research papers.

Q32: Does Dabrafenib induce or inhibit drug-metabolizing enzymes?

A32: Dabrafenib has been shown to both inhibit and induce drug-metabolizing enzymes. It inhibits various CYP enzymes (CYP2C8, 2C9, 2C19, 3A4), potentially affecting the metabolism of co-administered drugs. Conversely, it can also induce CYP3A4, leading to potential alterations in its own metabolism and that of other CYP3A4 substrates. [, , ]

Q33: Is there information on Dabrafenib's biocompatibility and biodegradability?

A33: The provided research papers do not focus on Dabrafenib's biocompatibility or biodegradability aspects.

Q34: What are alternative treatment options for BRAF V600E/K-mutated melanoma?

A34: Other BRAF inhibitors like Vemurafenib, as well as MEK inhibitors like Trametinib and Cobimetinib, are alternative treatment options for BRAF V600E/K-mutated melanoma. Immunotherapy options, including immune checkpoint inhibitors like Nivolumab and Ipilimumab, are also used in the treatment of advanced melanoma. [, , , ]

Q35: Do the research papers mention strategies for recycling or managing Dabrafenib waste?

A35: The research papers do not address strategies for recycling or managing Dabrafenib waste.

Q36: What research infrastructure and resources are important for studying Dabrafenib?

A36: Important resources include access to well-characterized human melanoma cell lines, in vivo models like mouse xenografts, high-throughput screening platforms for evaluating drug efficacy and potential resistance mechanisms, and advanced analytical techniques like LC-MS/MS for quantifying drug concentrations and monitoring metabolic activity.

Q37: When was Dabrafenib approved for the treatment of melanoma?

A37: Dabrafenib received FDA approval for the treatment of metastatic melanoma harboring the BRAF V600E mutation in 2013. [, ]

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